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Volume 1, Number 1, pp. 49-57, 1999.    


 


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Clinical Application of MRI Image Processing
in Neurology

H. Freya, A. Lahtinenb, T. Heinonenb, and P. Dastidarc

a Department of Neurology, Tampere University Hospital, Tampere, Finland
b Ragnar Granit Institute, Tampere University of Technology, Tampere, Finland
c Department of Radiology, Tampere University Hospital, Tampere, Finland


Abstract.The development of new computer based medical imaging methods have made the extremely rapid progress in both basic and clinical neurosciences possible. Among the new techniques MRI has made quantum leaps during the eightees and ninetees and has the greatest promise for future development especially when combined by fusion with other techniques to make the multimodal imaging and mapping of both the structure and function of the brain possible. In the following overview only a few of these developments can be partially covered. In order to understand the real influence of these technical advances several recent textbooks and thousands of individual articles plus abstracts should be summarized. Therefore also the prediction of the future progress of the most promising avenues to find new and relevant information is made impossible. A clinician can only present some ideas of the existing needs.


 

1. Remarks on Advances of Radiological Techniques in Neurology

Radiological techniques started to contribute relatively late in clinical neurology after the original discovery of x – rays in 1895 by Roentgen. The application of conventional skull x-ray techniques improved the diagnosis and treatment of skull traumas. But first the development of pneumo-encephalography for the study of the soft tissues and ventricles in the brain and myelography after injection of air or inert gas into the CSF space started a new stage of development. These techniques were slowly substituted after late fiftees by the introduction of contrast media (aortocervical and later selective angiographies and water insoluble and later water soluble opaque contrastmedia for myelography.

A new and revolutionary stage of the imaging techniques in neuroradiology and neurology started, when Hounsfield and Cormack developed CT (computerized tomography) and received a Nobel price in 1972. CT uses ionizing radiation, but it has no other major risks and is relatively comfortable for the patient. Until the development of spiral- techniques and 3D modelling the CT slices have been limited primarily to transaxial views. In CT images are generated by passing an x–ray beam through the skull or other object (e.g. spine and vertebral column) and measuring its degree of attenuation. The ability to attenuate x – rays of different tissues (e.g. brain, bone and CSF differs and can be measured numerically as a tissue density number for each voxel (volume element). These numbers can be converted to gray scale values and presented visually as pixels. A large number of reconstruction and filtering techniques are nowadays available to improve the quality of the pictures and thus also the diagnostics. The use of CT contrast media further improves the differential diagnostics.

MRI (Nuclear magnetic resonance imaging) is rapidly substituting CT as the best structural neuroimaging technique. MRI has also potential for the study of the biochemistry and physiology of the nervous system. In fact the principles of MRI are older than those of CT. The MR phenomenon was demonstrated already in 1946 by Bloch and Purcell. They got a Nobel price for this discovery in 1952.

However the first clinical applications in radiology appeared in the seventies. In MRI the object (head etc) is placed in a high field strength magnetic field ( from 0.5 to 1.5 Tesla usually). This concentrates the magnetic moment of individual protons and the net magnetic moment is then tipped by sending radio-frequency signals that excite the tissue. After this the protons relax again and return to their original position. Different relaxation times (T1 and T2) as well as proton density are measured and can be further manipulated by using various pulse sequences. Several quantum leaps have been made during eightees and ninetees in MRI techniques (e.g. Fast spin echo (FSE), high performance gradients, echo planar and diffusion weighted imaging , MR contrast agents and CSF fluid velocity analysis and introduction of interventional MRI).Bradley WG and Bydder GM, 1997.

The possibility to vary the components of the MR signal and the type of image generated improve the clinical applicability of MRI considerably especially for identifying pathological tissue. Thus the tissue resolution of MRI is far superior to the CT except for bone.

The introduction of MR contrast media has further widened the clinical applicability of MRI into MR angiography. MRI is also widening its applicability through such techniques as magnetic spectroscopy and echo planar imaging to measure tissue metabolism, physiology and cerebral blood flow.

2. Clinical Application of MRI Image processing in Neurology

It is imposssible to describe all the clinical applications of the abovementioned techniques in this context. One can only refer to a number of textbooks; e.g. Osborn NA 1994, Gonzalez et al. 1985, Taveras, J.M. Neuroradiology (third ed.) 1996, Bradley WG Jr and Bydder, GM 1997.

In general the first clinical applications were mainly finding of space occupying lesions (expanses and tumors in brain, as well as brain infarcts, intracerebral and other intracranial haemorrhages ).

MRI is much more sensitive than CT to be used in the analysis analysis of tissue pathology; in evaluation of degenerative and atrophic processes (ventricular and sulcar enlargement and cortical atrophy ). White matter plaques in multiple sclerosis, diffuse ischemia and infarction, haemorrhages, differential diagnosis of tumors, developmental anomalies and congenital malformations.

In addition to the structural changes in brain due to normal aging especially in dementias MRI has become an important auxiliary diagnostic tool.

Figure 1. In vascular dementias ischemic changes aswell as leucoaraiosis in periventricular white matter in addition to multiple infarcts help to right diagnosis.

In dementia of Alzheimer type the neurodegenerative changes particularly in hippocampus (volumetry) and related areas in temporal and parietal cortex , where also neuropathological postmortem changes are usually most profound help to make the right diagnosis. More recently such dementia entities as frontal lobe dementia and Lewy body dementia have been added among the differential diagnostics based partially on MRI. In Huntington´s disease patterns of hypometabolic activity are found in the basal ganglia of both the patients and their relatives in risk. FMRI can in near future be used in the diagnosis of Parkinson's disease and other extrapyramidal disorders. Recent findings of structural changes seen in MRI in schizophrenia are giving new light to the possible underlying pathology and probable early developmental lesions in this disease.

 

3. Recent Advances in the Development and Application of

3.1 Neuroimaging Methods in Neurology

The increasing use of different computer based imaging methods, multimodal imaging and 3D modelling and fusion of different imaging methods with each others have made new developments and application for use also in clinical applications possible. For these new developments are responsible especially the research initiatives, which have emerged after the publication of the Mapping the Brain and its functions report in U.S.A. (Poscura P and Martin J, 1992). For overviews in the recent developments see e.g. Toga AW and Mazziotta JG 1996 , Frackowiak RSJ et al. 1997.

3.2. Digital neuroatlases and their application

There exist several different ways and tools for building human ( or animal ) brain atlases. Atlas is a special form of map that incorporates stereotactic elements. Computerized stereotactic atlases are becoming more important for the localization and segmentation of human brain anatomy and physiology. Some of the tools available to analyse brain structures and functions at macroscopic level are listed in Table I.

Table I. Tools for macroscopic study of the brain

CT

MRI

MR spectroscopy (combined with topography)

SPECT

PET

EEG

MEG

Evoked potentials

Postmortem cryosectioning combined with staining

Multimodal imaging

____________________________

 

The most straightward approach is based on the use of only one fixed parameter for spatial normalization. E.g. shape and adjust the size (MRI image or section). Here in comparisons between different approaches the so-called densitometric approach seems to be the most reliable method sofar. Instead of this Talairach and Tournoux used anterior and posterior brain commisures as reference points.

Segmentation is a third alternative e.g. to separate white matter from gray matter or ventricles (CSF space). Brain image segmentation is especially well suited for this type of an approach.

Visualization is helpful especially in multimodal imaging atlases (fusions), where different colours can be painted over a grey scale.

The probabilistic approach means, that a large population of samples is treated statistically and medians of these digital samples are represented as standards. E.g. at the Montreal Neurological Institue a MRI brain atlas was created by combining MRI images taken from 305 normal 28 year old individuals. After this a median stereotactic digital neuroatlas was developed. (Evans AC et al. 1992).

One has to keep in mind, that a brain atlas is essentially also a database. By combining the other existing information with different types of databases (books, articles etc.) it is possible to increase enormously the efficiency of a digital neuroatlas.

We in Tampere have developed a different type of an approach. The original digital neurotlas is transferred on the corresponding sections of the MRI image of the patient The shape and size of the neuroatlas can be modified by using different mathematical algorithms (rubber sheet and wrap algorithms). Also the possible errors in the patient image (rotations, translations and stretching) can be corrected (Lahtinen A et al 1998). Some of the neuroatlases, which can be found in Internet are listed in Table II.

Table II. Neuroatlases in Internet

Talairach – Tournoux Brain Atlas

Talairach – Tournoux Referential Brain Atlas

Brodman Gyri Brain Atlas

SchaltenBrand – Wahren Brain Atlas (axial-, coronal-, sagittal slices.

Ono Kubik Sulcal Atlas (indexed)

The whole brain atlas

Atlas at Washington

Ito´s Brain Atlas

PET Brain Atlas

Atlas of Brain perfusion SPECT

The Human Brain: Dissections of the Real Brain

 

Figure 2. An example of the Tampere Brain Atlas to illustrate a brain infarct in the right a.cerebri media lesioning inferior frontal gyrus, both precentral and postcentral gyri and inferior parietal gyrus.

A second example of the use of neuroatlas, which shows an brain haemorrhage in a 3D axial serial section image

Figure 3. 3D image of a large haemorrage. This type of image can be used e.g. in planning of neurosurgery.

A third example is the localization of multiple sclerosis plaques in the white matter of brain after segmentation (Fig 4). This type of an approach is currently used to follow the possible effect of beta-interferon treatment of MS patients (Dastidar P. et al. 1999).

Figure 4. Axial T1 and T2 weighted MRI sections of MS plaques and brain atrophy.

However there are still problems transforming brains to a common atlas. Because of the individual variance and changes due to ageing the accuracy of brain atlases is restricted to limited regions of the

Brain. Especially cortex is problematic in this sense (Benayoun et al. 1994). Subcortical areas are more homologous and the points here are more easily identifiable (Kazanovskaya et al. 1991).

3.3 Application of fMRI in Clinical Neurology

fMRI trechniques are noninvasive, multiple, longitudinal. When compared with other functional brain imaging techniques (EEG, PET, magnetic source imaging and near infrared spectroscopic imaging, fMRI has good temporal resolution and excellent spatial resolution. Therefore it has become a new and very powerful research tool (Karni, A. et al. 1995) and has started to show considerable clinical benefit while studying the underlying pathology in different brain diseases. In future it may also be used to follow up the recovery of the brain lesions and be used to help in restorative neurology for higher cognitive functions.

In most fMRI studies, image sets are acquired while the patient is alternatively in an active and control state. While changes in cerebral blood flow and its oxygenation degree are measured. In the near future these types of techniques can also be applied to study the possible regional pathological changes related to CBF. In this connectiion fMRI has to be compared with diffusion imaging EPI techniques and SPECT or PET.

3.4. Clinical Applications of Volumetric image Analysis in Neurology

Despite of the still existing difficulties in practical application of volumetry these techniques have already been set widely to study such degenerative diseases of the brain as Alzheimer-type dementia (Erkinjuntti et al. 1993, Devernoy 1998). Brain tumors (Velthuizen et al.1995), brain infarcts (Heinonen et al.1998) and intracerebral hematomas (Dastidar et al.1997) aswellas MS plaques (Dastidar et al.1999).

In the near future 3D visualization will become a valuable tool for this type of applications in clinical neurology and planning of stereotactic neurosurgery, radiotherapy and follow up of the effect of treatment. (Heinonen et al.1998).

4. Some Future Prospects and needs

Especially in clinical neurosurgery the use of stereotactic methods, when combined with 3D modelling would benefit the planning and surgical treatment immensely. The same is due to radiotherapy of brain tumors. The future applications of fMRI and multimodal imaging techniques will open up totally new ways to understand the cognitive and psychiatric disorders. The combination of these techniques with already existing international databases and their use will also improve the diagnostics and treatment of brain and other nervous system disorders much. At the same time the need to educate new clinical neuroscientists and clinicians who can understand and use these techniques will become an absolute necessity. In fact it is necessary to train a new generation of specialists to fulfil all these demands.

References

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[3] Taveras, J.M., Neuroradiology, Third ed. Williams and Wilkins Press.1996. .

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[20] Heinonen T., Visala K., Blomqvist M., Eskola H. and Frey H.: 3Dvisualization library for multimodal images. Comp.Med.Imaging and Graphics.22.267-273.1998.

 

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