Visualization Procedures for Volume and Surface
Current Density Distributions in Cardiac Regions
M. Ziolkowski*, J. Haueisen**, and U. Leder***
* KETiI, Technical University of Szczecin, Szczecin, Poland
** Biomagnetic Center, Friedrich-Schiller-University Jena, Jena, Germany
*** Clinic of Internal Medicine III, Friedrich-Schiller-University, Jena, Jena, Germany
Correspondence: mz@ps.pl
Abstract. New methods for postprocessing and visualization
of 3-D current density reconstruction results are presented. The methods
are based on equivalent ellipsoids/circles fitted to 3D current density
distributions. The new techniques have been found useful for the analysis
of data in inverse cardiac problems, enabling statistical postprocessing
for the sake of comparisons of different source reconstructions algorithms
or comparisons of groups of patients or volunteers. For fitting the equivalent
ellipsoids, three different approaches are presented. For 3-D surface-based
source reconstruction a new technique based on so called Dali's objects
is formulated giving the possibility of better visualization of results
than the equivalent ellipsoid.
Keywords: biomagnetics, biomedical electromagnetic imaging,
visualization, statistics
Introduction
Current density reconstructions (CDRs) of cardiac activation based on non-invasively
obtained MCG (magnetocardiogram) and ECG (electrocardiogram) data are a
new and promising tool and might support diagnoses in cardiology [6]. A
typical result of a CDR is a color-coded activation map representing the
magnitude of the current density in a volume or on a surface (e.g. the
left ventricular surface, see Fig. 7) or a current dipole distribution
in 3-D space. Commonly, these maps are interpreted by the cardiologist
and represent the end point of analyses. However, for statistical data
analyses (e.g. in group studies) a method is needed which enables a comparison
of current density distributions for different time points and within groups
of patients or volunteers. One way to achieve this goal is the proper parameterization
of current density distributions and the application of statistical analyses
to the parameters extracted. Previously, a parameterization based on the
visual inspection of up to 8 sub-areas of the heart has been applied [7].
These sub-areas have been manually classified into active or not active
ones and statistics have been computed about the number of classified sub-areas.
One clear disadvantage of this method is that it yields only a very rough
statistical description of the location and extent of the activation maximums
and minimums. In this paper, we expand a new technique which has been introduced
previously for 2-D planes [8] and full 3-D problems [9] to surface CDRs.
This technique is based on the parameterization of current density distributions
with the help of equivalent circles. The usefulness of our new technique
is demonstrated through patient data.
Methods
A. Equivalent ellipsoid
An equivalent ellipsoid has been defined as a 3-D ellipsoidal object
fitted to a current density distribution region in which the magnitude
of the currents is above a certain threshold (in the following called supraliminal
current density distribution). Reasons for the equivalent ellipsoid technique
have been its geometrical simplicity (easy visualization) and a straightforward
interpretation of lengths and directions of axes in the current density
distributions. Fig. 1 shows an example of CDR results and the fitted ellipsoid.
The equivalent ellipsoid is defined by its three orthogonal semi-axes (
a=a1a,
b=b1b,
c=c1c),
where denotes
the unit vector connected to the axis .
The fitting procedure has been realized in several steps.
First, the threshold
Th
used for marking the most important region in CDR has been defined by
Th= 100%*(
Qmax+Qmean)/Qmax, where
Qmax is the maximum and
Qmean is
the mean value of the dipole moments in the current distribution. Then,
the center of gravity of the marked region (COG, PCOG)
has been calculated. The position of the COG has been used as a new origin
of the local coordinate system for the equivalent ellipsoid estimation.
The direction of main axis
1a
of the equivalent ellipsoid has been computed on the basis of three different
approaches (Fig. 1b). In the first approach, 1a
has been estimated through the normalization of the position of the dipole
with the weighted longest distance from the COG (LD). The weighting
of the distance has been done by the dipole moment in order to avoid that
small and far off dipoles have a large influence on the definition of the
main axis. In the second approach, the normalized position of the CDR maximum
has been applied (PM). The dominant direction (DD) of the
supraliminal region (defined by ,
where Mi denotes the
moment of i-th current dipole and NT is
the number of dipoles in the a supraliminal region) has been employed in
the third approach. Please note that DD is based on the sum of the
current dipoles (vectors) and therefore represents a completely different
approach than the other two approaches. The local coordinate system has
been rotated so that the vector 1a
represents the z-axis of the new coordinate system. In the rotated
coordinate system, the normalized position of the dipole with the maximal
distance from PCOG on the new x-y
plane has been used as the direction of the second semi-axis of the equivalent
ellipsoid (1b) (Fig.1c).
The direction of the third axis has been determined by (Fig.
1d). The average length of all axes of the equivalent ellipsoid
in the new orthogonal coordinate system (
1a,
1b,
1c)
has been calculated iteratively according to
|
 |
(1) |
where .
The factor g is equal to 1 and iteratively increased by 1% until
the inside ratio ( IR) is
above 70%. The inside ratio of the equivalent ellipsoid has been
introduced in order to estimate how many current dipoles are located
inside the equivalent ellipsoid. Each dipole has been associated
with a voxel representing a small volume around the dipole. We have
defined a voxel as an elementary cube centered around a current dipole
with the edge length equal to the minimum inter distance between
the current dipoles in the distribution. The inside ratio
IR
has been defined as the ratio of volume of dipole voxels located
inside the ellipsoid to the volume of all voxels in the supraliminal
distribution.
Figure 1. Construction of the equivalent ellipsoid:
current density distribution given as a set of current dipoles (
a),
supraliminal distribution and vector
1a
for differentapproaches (
b), vector
1b for the longest
distance approach (
LD) (
c), equivalent ellipsoid estimated
on the basis of the longest distance approach (
LD) (
d).
In order to assess the quality of the equivalent ellipsoid we have introduced
a goodness factor Go, which has
been defined as the volume ratio of the dipole voxels located inside the
ellipsoid and the equivalent ellipsoid. The equivalent ellipsoid technique
has been tested through the use of the two problems depicted in the following
sections.
B. Equivalent circle (Dali's object)
The idea of equivalent circle has been influenced by the Salvador Dali's
picture "The persistence of memory", which shows three clocks fitted
to the curved surfaces (Fig. 2).
Figure 2. The persistence of memory, Salvador Dali (1936)
(Salvador Dali Art Gallery, http://www.dali-gallery.com).
In order to apply the equivalent circle technique the reconstructed
current density distribution has to be defined as a set of current dipoles
on a surface. The information about the neighborhood of every current dipole
or about the surface itself has to be given too. This is not very strong
limitation because usually, the surface on which the CD is reconstructed
has to be defined first. Standard output files from Curry ( .cdr files)
contain information about the neighborhood. To realize the equivalent circle
technique a following algorithm has been formulated:
-
A supraliminal current density distribution is defined according to the
description in section A.
-
From the supraliminal current density distribution, a mesh of triangular
elements is constructed similar. The outer line of this mesh is smoothed
according to a suitable angle criterion. The constructed mesh can also
be used for plotting the magnitude of the CDR in the region of interest
(Fig. 3 and 4)
Figure 3. Supraliminal current density distribution
(left) and triangular mesh with outline points (right) .
Figure 4. Triangular mesh with smoothed outline
(left) and the magnitude distribution of reconstructed CD over
non-smoothed mesh (right).
-
The center of gravity (COG) is calculated for the supraliminal mesh. Next,
an average normal to the surface is computed as the average sum of normals
found for every node in the supraliminal mesh. The COG is projected on
the supraliminal surface using the average normal direction as a projection
vector. The projected COG is used as the center of the equivalent circle.
-
The set of 32 planes crossing the projected and original COG is set up
with the constant angle between the planes (11.25o).
These planes define meridian lines (traces) on the supraliminal (Fig. 5)
Figure 5. Meridian traces with the pole located in
projected COG.
-
An average concentration radius of the CDR is calculated on the basis of
the average lengths of the traces and defines the radius of the equivalent
circle.
-
Using the meridian traces and starting from the projected COG, five equidistant
curves lying evenly with a parallel of latitude are set up. In this process
a geodesic measure has been applied producing a set of points shown in
Fig.6 (left). If the distance from the pole is larger than the radius
of the equivalent circle the position of point lying outside the distribution
is determined on the basis of the last part of the meridian trace.
Figure 6. Set of equidistant points lying evenly
with a parallel of latitude (left) and equivalent circle (
Dali's object) (right).
-
The set of equidistant points is used to create an equivalent circle fitted
to the 3-D surface on which CD is reconstructed. The constructed equivalent
circle (in a form of triangular mesh) is now named as Dali's object.
Several parameters accompanying a Dali's object can be used in statistical
comparisons e.g. the position of the projected COG, the average concentration
radius, the area of the supraliminal region, maximum and minimum length
of the meridian traces determined on the basis of geodesic or Euclidian
measure.
C. Patient data
The measurements have been taken in a magnetically shielded room (AK3b,
Vacuumschmelze, Hanau, Germany) at the Biomagnetic Center in Jena, Germany.
The magnetic field has been recorded with a twin dewar biomagnetometer
system (2x31 channels) with first order axial gradiometers (Philips, Hamburg,
Germany) [1]. Using system described above, we have measured the magnetocardiagram
of a patient aged 70 years who had non- sustained ventricular tachycardia
that developed after anterior left ventricular myocardial infarction and
apical aneurysm at the Biomagnetic Center Jena. The subject has been lying
in a supine position and the two dewars have been positioned above the
thorax so that they covered the field maximums. We have recorded 600 s
of signals at a sampling rate of 1000 Hz. To stabilize the baseline,
an analog high pass filter (first order, 0.036
Hz) has been applied
to the analog signals. We have performed a two step averaging procedure
as described in [5] in order to improve the signal-to-noise ratio. A noise
level of 50 fT has been estimated in both dewars. The last 40 ms
of the bi-directional 30 Hz highpass filtered depolarization signal
(late potentials, LP) have been used for inverse computations. A 3-D MRI
data set of the chest of the patient has been obtained. A BEM model consisting
of the left and right lungs as well as the outer torso surface has been
applied for the magnetic field computations (forward model). We have used
a triangular mesh with 2990 nodes and a linear potential approach for each
triangle [3]. The surface of the lungs has been eroded by 3 mm in
order to avoid numerical problems arising from a too short distance between
the currents on the left ventricle (lv) and the surface of the lungs
[4]. The conductivity ratio of torso to lungs was 5 to 1. The surface of
the lv has been segmented from the MRI data set and subsequently
used for the restriction of the source space. Two source configurations
have been investigated. The first configuration has consisted of dipoles
distributed on the surface of the left ventricle (1022 dipoles with an
average dipole spacing of 4.7
mm). In the second one, a regular
grid of dipolar sources (5 mm grid spacing in x, y, and z)
has been placed into the lv resulting in 1715 current dipoles. The source
parameters (dipole strength and orientation) have been determined through
a minimum norm least squares algorithm (L2 norm) [2]
for all time points. The equivalent ellipsoids have been estimated on the
basis of the distribution containing the dipoles with the maximum strength
over the last 40 ms time interval (LP).
Results
Figure 7 shows a diaphragmal view on the segmented 3-D surfaces and the maximum
magnitude of the reconstructed dipole distribution in the late potential
interval (LP image). The area with high activation corresponds to the infarcted
area [6]. Figure 8 shows the equivalent ellipsoids found for the CDRs (minimum
L2 norm) on the surface of the lv and on
the regular 3-D grid of points located inside the left ventricle.
Figure 7. Diaphragmal view on the 3-D magnetic
resonance torso image (a), magnetic late potentials (LP) heart signals
and analyzed time interval (gray) (b), zoomed diaphragmal surface
of the left ventricle: LP image (c). The scale indicates the maximum
dipole magnitude at every location during the LP interval.
Figure 8. Equivalent ellipsoids fitted to the
reconstructed current dipole distributions located on the surface of the
left ventricle (lower row) and on the regular 3-D grid points inside
the left ventricle (upperrow) using different approaches. Diaphragmal
view (left column), apical view (middle column), and magnified
apical view for DD approach (right column).
The PM approach has yielded larger ellipsoids for the surface-based
reconstructions than the other two approaches (Fig. 8). The results in
Table I demonstrate that LD and DD yield similar volumes
and semi-axes lengths, while PM clearly differs. The PM approach
also exhibits the lowest goodness factor for the surface-based reconstruction
in Table I, while the DD approach has the best goodness factor.
The difference between the surface and 3-D grid- based COG for the supraliminal
region has been equal to 4.3 mm.
TABLE I. Equivalent ellipsoids parameters for maximum LB
For the surface CDR the Dali's object has been constructed (Fig. 9). The
area of supraliminal region found for the threshold Th=
69.7% is equal to 1601.1 mm2. The
length of the minimum and maximum meridian traces is equal 17.0 mm
and
32.0 mm respectively. The comparison with the minimum and maximum
distances of the outline points to the projected COG (which are equal 15.9
mm and 29.6 mm) gives an imagination about the relatively
small local curvature of the supraliminal region. The average convergence
radius around the projected COG located in [26.9, -26.2, -24.6]
mm
has been found as 23.0 mm. The area of Dali's object calculated
as an area of the circle using the convergence radius is equal 1655.5 mm2
and based on a real object 1524.1 mm2.
The percentage ratio of the real Dali's object area to the supraliminal
region area can be treated as the fitting quality factor in the equivalent
circle technique (95.1% in the presented case).
Figure 9. Dali's object fitted to the reconstructed
current dipole distribution located on the surface of the left ventricle
(d), meridian "legs" of Dali's object (c), supraliminal
region found for Th=69,7% (a) and current
density magnitude distribution (b).
Conclusions
In this paper we have introduced new techniques which enable the postprocessing
of 3D CDRs. The techniques have been found to be useful for the analysis
of inverse cardiac problems. Three different approaches of the algorithm
have been tested. For 3-D grid-based CDRs all approaches yielded similar
results. However, for a surface-based CDR the DD approach has been found
to be the most appropriate one. One major advantage of the equivalent ellipsoid/circle
techniques proposed is that they extract parameters from CDRs which can
be used for statistical analyses (volume of the equivalent ellipsoid, length
and direction of the semi-axes, COG, convergence radius, area of supraliminal
surface). This allows both comparisons of different algorithms and comparisons
of groups of patients or volunteers. Furthermore, the both procedures provide
an easy and straightforward visualization of the foci of even very complex
3-D current density distributions. There are some limitations of the presented
methods. The algorithms depicted have been applied only to CDRs with a
single focus. In order to deal with multi-focal distributions an iterative
strategy should be used. One possible strategy is to find local supraliminal
regions and to employ the algorithms separately to each focus.
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